I have an iPad Mini running iOS 7.0.1 jailbroken, it ran out of battery last night so I let it be, but I charged it tonight and when it turned on all my apps were gone, yet the space wasn't recovered and in iTunes the few gigabytes of Apps that it showed in the little bar was now changed to "Other" space, and these apps aren't gone as I was looking in the /var/mobile/Applications folder in iFile and all my apps are still there; yet they don't show up on the home page or any folder or any other pages. Is there any way to recover them?

I have turned it on and off a few times, yet they still don't show up.